Molecular Diagnostics Laboratory

The Molecular Diagnostics Section tests for a wide variety of pathogens using an array of molecular techniques. These molecular techniques, such as real-time PCR, allow for highly sensitive testing on a small amount of sample, with a very rapid rate of detection, making it an invaluable tool in the detection of infectious disease.


ADRDL Molecular Diagnostic Work

General Guidelines

  • Samples need to arrive before 11 a.m. on the scheduled testing day for results to be completed on the same day as submission.
  • Please label the samples with consecutive numbers (1,2,3鈥tc.) and submit with a corresponding animal identification form and submission form.
  • Unless required, you do not need to write the animal identification number directly on the tube if it is linked with the sample number on the animal identification spreadsheet.
  • Submission and animal identification forms can be emailed to the lab at sdsu.adrdl@sdstate.edu

Pooling samples may decrease the sensitivity of PCR, so consider consulting with the laboratory or your veterinarian to determine if pooling should be performed.


For additional questions contact the 成人视频 Molecular Diagnostics section at 605-688-5171.

Molecular Diagnostics Personnel

ADRDL User Guide

Description Fee Service Area Species Test Days Turnaround Time
16S DNA Sequencing $135.00 Molecular Diagnostics Porcine As needed Five to seven business days
African Swine Fever (ASF) PCR $50.00 Molecular Diagnostics Porcine As needed As needed
Anaplasma marginale PCR $41.00 Molecular Diagnostics Bovine As needed As needed
Avian Influenza H5 Subtyping PCR $35.00 Molecular Diagnostics Avian As needed Two to four business days
Avian Influenza H7 Subtyping PCR $35.00 Molecular Diagnostics Avian As needed Two to four business days
Avian Influenza PCR $50.00 Molecular Diagnostics Avian As needed As needed
Avian Metapneumovirus (aMPV) Real-Time PCR subgroups A,B $35.00 Molecular Diagnostics Avian Weekly Seven business days
Avian Paramyxovirus Serotype-1 (APMV-1) PCR $50.00 Molecular Diagnostics Avian As needed As needed
Avian Paramyxovirus Serotype-1 (APMV-1) Virulent Newcastle Disease PCR $35.00 Molecular Diagnostics Avian As needed As needed
BHV-1 SNP Analysis (IBR Typing) Sequencing $342.00 Molecular Diagnostics Bovine As needed Five to seven business days
Bluetongue Virus (BTV) PCR $46.00 Molecular Diagnostics Bovine As needed As needed
Bovine Leukemia Virus (BLV) PCR $46.00 Molecular Diagnostics Bovine Monday (setup) One to five business day(s) (test volume dependent)
Bovine respiratory PANEL 1 (Includes Bovine Respiratory Syncytial Virus, Bovine Coronavirus, and Mycoplasma bovis) $46.00 Molecular Diagnostics Bovine Monday (setup) One to five business day(s) (test volume dependent)
Bovine respiratory PANEL 2 (Includes mannheimia haemolytica, pasteurella multocida, histophilus somni) $46.00 Molecular Diagnostics Bovine Monday (setup) One to five business day(s) (test volume dependent)
Bovine respiratory PANEL 3 (Includes: Bovine Viral Diarrhea Virus, Bovine Herpesvirus Type 1 and Influenza D Virus (BVDV/BHV-1/IDV) Multiplex PCR) $46.00 Molecular Diagnostics Bovine Monday (setup) One to five business day(s) (test volume dependent)
Bovine Rotavirus and Coronavirus (Enteric Panel) $41.00 Molecular Diagnostics Bovine Monday (setup) One to five business day(s) (test volume dependent)
Bovine Viral Diarrhea Virus (BVDV) PCR $35.00 Molecular Diagnostics Bovine Monday, Wednesday, Friday Two business days
Bovine Viral Diarrhea Virus 5 UTR Sequencing $135.00 Molecular Diagnostics Bovine As needed One to five business day(s) (test volume dependent)
Brachyspira spp. Differentiation (Nox Gene Sequencing) $135.00 Molecular Diagnostics Porcine As needed As needed
Brachyspira spp. PCR $35.00 Molecular Diagnostics Porcine Tuesday, Thursday, Friday One to two business day(s)
BVD Typing/5 UTR Sequencing $135.00 Molecular Diagnostics Bovine As needed Five to seven business days
Clostridium perfringens toxin gene typing $60.00 Molecular Diagnostics Bovine, Porcine Monday (setup) One to five business day(s) (test volume dependent)
Epizootic Hemorrhagic Disease Virus (EHDV) PCR $46.00 Molecular Diagnostics Bovine, Cervidae As needed As needed
Escherichia coli (E. coli) PCR Genotyping - Bovine $60.00 Molecular Diagnostics Bovine Monday (setup) One to five business day(s) (test volume dependent)
Escherichia coli (E. coli) PCR Genotyping - Porcine $60.00 Molecular Diagnostics Porcine Monday (setup) One to five business day(s) (test volume dependent)
Flavobacterium Psychrophilum PCR $25.00 Molecular Diagnostics Aquatic As needed Five to seven business days
Foot and Mouth (FMD) PCR $50.00 Molecular Diagnostics Bovine As needed
Influenza A Hemagglutinin (HA) and Neuraminidase (NA) Subtyping - Swine $50.00 Molecular Diagnostics Porcine As needed As needed
Influenza A Neuraminidase (NA) Gene Sequencing - Swine $247.00 Molecular Diagnostics Porcine As needed Ten business days
Influenza A Only PCR (IAV-S) $25.00 Molecular Diagnostics Porcine Monday-Friday Same day
Influenza A PCR $50.00 Molecular Diagnostics Avian, Canine, Equine Monday-Friday Two to five business days
Lawsonia intracellularis PCR $27.00 Molecular Diagnostics Porcine
Leptospira sp. PCR $35.00 Molecular Diagnostics Bovine, Canine, Equine, Ovine, Porcine Monday One to five business day(s) (test volume dependent)
Mycobacterium Avium ssp. Paratuberculosis (Johne s Disease) PCR $30.00 Molecular Diagnostics Bovine, Caprine, Ovine Monday (setup) One to five business day(s) (test volume dependent)
Mycobacterium Avium ssp. Paratuberculosis (Johne s Disease) PCR - Pooled $40.00 Molecular Diagnostics Bovine Monday (setup) One to five business day(s) (test volume dependent)
Mycoplasma Bovis PCR $30.00 Molecular Diagnostics Bovine Monday (setup) One to five business day(s) (test volume dependent)
Mycoplasma hyopneumoniae PCR $27.00 Molecular Diagnostics Porcine Tuesday, Thursday, Friday Two business days
Mycoplasma hyosynoviae/Mycoplasma hyorhinis Multiplex PCR $50.00 Molecular Diagnostics Porcine As needed Two business days
Ovine Herpesvirus-2 (Malignant Catarrhal Fever) $46.00 Molecular Diagnostics Bovine, Caprine, Cervidae, Ovine As needed Two to four business days
PCV2/PCV3 Multiplex PCR $35.00 Molecular Diagnostics Porcine Monday-Friday Two business days
Porcine Circovirus Type 2 ONLY PCR (PCV2) $35.00 Molecular Diagnostics Porcine Monday-Friday Two business days
Porcine Circovirus Type 2 Sequencing $135.00 Molecular Diagnostics Porcine As needed Five to seven business days
Porcine Circovirus Type 3 Only PCR (PCV3) $35.00 Molecular Diagnostics Porcine Monday-Friday Two business days
Porcine Circovirus Type 3 Sequencing $135.00 Molecular Diagnostics Porcine As needed Five to seven business days
Porcine Epidemic Diarrhea Virus S1 Sequencing $228.00 Molecular Diagnostics Porcine As needed Five to seven business days
Porcine Epidemic Diarrhea Virus, Transmissible Gastroenteritis Virus and Porcine Deltacoronavirus (PEDV/TGEV/PDCoV) PCR $30.00 Molecular Diagnostics Porcine Monday-Friday Same day
Porcine Fecal Panel 1 (1-10 days age) $165.00 Molecular Diagnostics Porcine
Porcine Fecal Panel 3 (8 wks + age) $107.00 Molecular Diagnostics Porcine
Porcine Parvovirus (PPV) PCR $27.00 Molecular Diagnostics Porcine As needed As needed
Porcine Reproductive and Respiratory Syndrome Virus (PRRSV) PCR $25.00 Molecular Diagnostics Porcine Monday-Friday Same day
Porcine Reproductive and Respiratory Syndrome Virus (PRRSV) PCR - Semen $35.00 Molecular Diagnostics Porcine Monday-Friday Same day
Porcine Rotavirus (Type A, B and C) Multiplex PCR $40.00 Molecular Diagnostics Porcine Thursday Two business days
Porcine Teschovirus (PTV)/Sapelovirus (PSV) Multiplex PCR $50.00 Molecular Diagnostics Porcine As needed Two business days
PRRSV Only PCR $25.00 Molecular Diagnostics Porcine Monday-Friday Same day
PRRSV ORF 5 Sequencing $149.00 Molecular Diagnostics Porcine Monday-Friday Three to four business days
PRRSV/Influenza A Multiplex PCR $25.00 Molecular Diagnostics Porcine Monday-Friday Same day
Seneca Valley Virus (SVA) PCR $34.00 Molecular Diagnostics Porcine Monday-Friday Same day
Special Sequencing Molecular Diagnostics
Tritrichomonas Foetus PCR $30.00 Molecular Diagnostics Bovine Monday, Wednesday, Friday One to two business day(s)
Viral Hemorrhagic Septicemia (VHS) Virus PCR $46.00 Molecular Diagnostics Aquatic As needed Ten business days